Open Veterinary Journal

Peer-Reviewed Journal

Effects of storage temperature on the quantity and integrity of genomic DNA extracted from mice tissues: A comparison of recovery methods


Huda H. Al-Griw(1,*), Zena A. Zraba(2), Salsabiel K. Al-Muntaser(2), Marwan M. Draid(3), Aisha M. Zaidi(4), Refaat M. Tabagh(2) and Mohamed A. Al-Griw(2)


Department of Microbiology and Parasitology, Faculty of Veterinary Medicine, University of Tripoli, Tripoli, Libya

Department of Forensic Biology, Faculty of Science, University of Tripoli. Tripoli, Libya

Department of Pharmacology, Toxicology and Forensic Medicine, Faculty of Veterinary Medicine, University of Tripoli, Tripoli, Libya

Department of Physiology, Biochemistry and Animal Nutrition, Faculty of Veterinary Medicine, University of Tripoli, Tripoli, Libya

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Abstract

Efficient extraction of genomic DNA (gDNA) from biological materials found in harsh environments is the first step for successful forensic DNA profiling. This study aimed to evaluate two methods for DNA recovery from animal tissues (livers, muscles), focusing on the best storage temperature for DNA yield in term of quality, quantity, and integrity for use in several downstream molecular techniques. Six male Swiss albino mice were sacrificed, liver and muscle tissues (n=32) were then harvested and stored for one week in different temperatures, -20°C, 4°C, 25°C and 40°C. The conditioned animal tissues were used for DNA extraction by Chelex-100 method or NucleoSpinÒ Blood and Tissue kit. The extracted gDNA was visualized on 1.5% agarose gel electrophoresis to determine the quality of gDNA and analysed spectrophotometrically to determine the DNA concentration and the purity. Both methods, Chelex-100 and NucleoSpinÒ Blood and Tissue kit found to be appropriate for yielding high quantity of gDNA, with the ChelexÒ100 method yielding a greater quantity (P < 0.045) than the kit. At -20°C, 4°C, and 25°C temperatures, the concentration of DNA yield was numerically lower than at 40°C. The NucleoSpinÒ Blood and Tissue kit produced a higher (P=0.031) purity product than the Chelex-100 method, particularly for muscle tissues. The Chelex-100 method is cheap, fast, effective, and is a crucial tool for yielding DNA from animal tissues (livers, muscles) exposed to harsh environment with little limitations.

Keywords: DNA degradation, DNA extraction, DNA profiling, Purity, Temperature.

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Cite this paper:

Al-Griw, H.H., Zraba, Z.A., Al-Muntaser, S.K., Draid, M.M., Zaidi, A.M., Tabagh, R.M. and Al-Griw, M.A. 2017. Effects of storage temperature on the quantity and integrity of genomic DNA extracted from mice tissues: A comparison of recovery methods. Open Vet. J. 7(3), 239-243.